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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01021212.1_1878_1961_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1878 - 1961

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGTCTG

5'SS Class:

strong_major

3'SS Sequence:

GTGCCCCCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CACTGAC

U12 Branch Point Sequence:

GCCCCACTGACG

Flanking Amino Acid:

REEPGVLPPEAPRRRKVPRL

Intron Amino Acid Position:

198

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.5

0.95

0.8

77.8

38.7

Major BPS

61.3

0.28

52.7

34.2

Major PPT

65.1

0.34

0.9

54.8

36.5

Minor 5ss

32.4

-2

40.4

45.7

Minor BPS

42.3

-0.7

1.9

43.07

41.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022994

Chromosome:

PEDO01021212.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026734

21 - 2651

2631