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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01021212.1_2076_2160_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2076 - 2160

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGTGGG

5'SS Class:

strong_major

3'SS Sequence:

GGTCGCCCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CACACAT

U12 Branch Point Sequence:

CGCCCCACACAT

Flanking Amino Acid:

LQPEAHCQPLVIPEPPSLRR

Intron Amino Acid Position:

236

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

0.9

64.9

41.1

Major BPS

57.6

0.19

64.6

32.2

Major PPT

62.3

0.28

0.9

50.9

39.3

Minor 5ss

26.8

-2.7

28.2

38.6

Minor BPS

37.7

-0.8

1.9

48.81

43.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022994

Chromosome:

PEDO01021212.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026734

21 - 2651

2631