Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01021219.1_2699_2797_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2699 - 2797

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGGGGACC

5'SS Class:

major

3'SS Sequence:

GTCCTCCCCGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTTAG

U12 Branch Point Sequence:

GTGTTCTTAGCG

Flanking Amino Acid:

CLDRFARVLKISNDPSPGYN

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.1

0.62

35.3

Major BPS

67.5

0.43

1.5

65.7

43.2

Major PPT

0.5

0.8

65.6

30.3

Minor 5ss

26.7

-2.7

3.2

34.1

41.8

Minor BPS

60.7

0.2

1.7

63.68

44.2

Associated Gene:

Gene:

OSGEP

Ensembl Gene ID:

ENSAPLG00000003087

Chromosome:

PEDO01021219.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036701

767 - 3732

2966

ENSAPLT00000003122

21 - 3732

3712