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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01021246.1_1177_1310_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1177 - 1310

Intron Length:

134

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGTGCT

5'SS Class:

strong_major

3'SS Sequence:

CCTGTTCCTCTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGAGCAT

U12 Branch Point Sequence:

TTTCCGTCCAAA

Flanking Amino Acid:

DAQLDAYNARLP*

Intron Amino Acid Position:

197

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.9

0.87

0.9

78.8

35.5

Major BPS

49.2

-0

1.5

59.7

46.7

Major PPT

74.3

0.55

0.8

65.9

Minor 5ss

34.9

-1.7

3.2

42.4

44.3

Minor BPS

41.8

-0.6

2.6

62.51

43.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000014745

Chromosome:

PEDO01021246.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034634

911 - 4304

3394