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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01021323.1_429_519_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

429 - 519

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTGGGGAGG

5'SS Class:

major

3'SS Sequence:

CGTGCTGCATAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GGTACAC

U12 Branch Point Sequence:

GCGTGCTGCATA

Flanking Amino Acid:

PGWGGHHGVGDAVTVVAGAP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

64.7

0.35

1.1

51.3

46.9

Major BPS

-0.2

1.3

52.4

43.3

Major PPT

50.4

0.01

1.1

53.6

40.7

Minor 5ss

24.4

-2.9

3.1

21.3

37.7

Minor BPS

41.4

-0.6

2.2

48.21

42.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023281

Chromosome:

PEDO01021323.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022378

384 - 693

310