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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01021341.1_175_306_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

175 - 306

Intron Length:

132

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTGAGTTCT

5'SS Class:

strong_major

3'SS Sequence:

CTCTCGCCCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GACGCAT

U12 Branch Point Sequence:

CATCCTGGACGC

Flanking Amino Acid:

LIPRSILAMHAQDPQMLDQL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.73

79.6

29.1

Major BPS

47.8

-0.1

1.5

57.3

41.7

Major PPT

66.6

0.37

0.8

33.2

Minor 5ss

39.8

-1.1

55.2

42.1

Minor BPS

34.4

-1.2

2.2

41.04

39.2

Associated Gene:

Gene:

LDB1

Ensembl Gene ID:

ENSAPLG00000012702

Chromosome:

PEDO01021341.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013248

85 - 1558

1474