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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01021341.1_391_577_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

391 - 577

Intron Length:

187

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGA|GTAAGTGCG

5'SS Class:

major

3'SS Sequence:

CTGCTCCCCGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTCTAAC

U12 Branch Point Sequence:

TTGTGTCTAACC

Flanking Amino Acid:

LSNSTLNYLRLCVILEPMQE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.2

0.57

1.1

63.5

41.4

Major BPS

66.8

0.42

1.2

69.6

35.5

Major PPT

71.8

0.49

0.8

65.7

30.3

Minor 5ss

34.3

-1.8

3.1

38.2

40.5

Minor BPS

53.3

0.08

2.1

70.56

41.2

Associated Gene:

Gene:

LDB1

Ensembl Gene ID:

ENSAPLG00000012702

Chromosome:

PEDO01021341.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013248

85 - 1558

1474