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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01021341.1_702_826_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

702 - 826

Intron Length:

125

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGTCTG

5'SS Class:

strong_major

3'SS Sequence:

CCTCCCGGGCCAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GGCTGAC

U12 Branch Point Sequence:

TCGGGGCTGACC

Flanking Amino Acid:

QKWQRMVAPPAEPARQQPSK

Intron Amino Acid Position:

100

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.6

0.77

0.9

70.5

41.3

Major BPS

49.4

-0

1.3

42.8

41.8

Major PPT

56.3

0.14

1.1

49.1

39.3

Minor 5ss

32.5

-2

38.1

40.9

Minor BPS

-1.1

2.5

45.49

43.9

Associated Gene:

Gene:

LDB1

Ensembl Gene ID:

ENSAPLG00000012702

Chromosome:

PEDO01021341.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013248

85 - 1558

1474