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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01021366.1_4842_4959_F

Intron Information:

Intron Rank:

135377

Intron Class:

major

Intron Phase:

Intron Coordinates:

4842 - 4959

Intron Length:

118

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTGAGTCGT

5'SS Class:

strong_major

3'SS Sequence:

TTTCTCCCTAAAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAGTAAC

U12 Branch Point Sequence:

TTCTCCCTAAAG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.6

0.72

68.8

43.8

Major BPS

57.9

0.2

1.1

59.4

34.8

Major PPT

75.3

0.57

75.7

Minor 5ss

30.1

-2.3

2.9

41.8

Minor BPS

61.2

0.21

1.9

69.58

43.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022839

Chromosome:

PEDO01021366.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040468

910 - 5237

4328