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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01021383.1_460_1237_R


Intron Information:

Intron Rank:
142664

Intron Class:
major

Intron Phase:

Intron Coordinates:
460 - 1237

Intron Length:
778

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAT|GTGAGTACT

5'SS Class:
strong_major

3'SS Sequence:
TTTTTCCCCACAG|A

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
CCTTCAT

U12 Branch Point Sequence:
TTTTTCCCCACA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
81.8
0.75
1
82.6
29.4

Major BPS
75
0.62
1.1
77.2
36

Major PPT
85.9
0.81
0.7
81
24.3

Minor 5ss
35.4
-1.7
2.9
48.5
40.3

Minor BPS
48.2
-0.1
2.2
71.95
40.1

Associated Gene:

Gene:

Ensembl Gene ID:

Chromosome:
PEDO01021383.1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

31 - 2553
2523

31 - 2553
2523