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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01021386.1_317_1279_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

317 - 1279

Intron Length:

963

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CCT|GCCAGCACC

5'SS Class:

weak_major

3'SS Sequence:

GGTGCCCCTGGAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TGGCGAC

U12 Branch Point Sequence:

CCCCCGGCAGCT

Flanking Amino Acid:

CRPLRHHWDASARLLRPPPA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

51.1

0.03

1.5

62.4

40.5

Major BPS

43.5

-0.4

1.4

35.6

42.9

Major PPT

48.3

-0.1

1.7

51.2

39.3

Minor 5ss

28.7

-2.4

3.8

46.4

41.5

Minor BPS

31.8

-1.3

2.5

44.75

46.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023073

Chromosome:

PEDO01021386.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031785

163 - 1377

1215