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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01021387.1_8262_8338_R


Intron Information:

Intron Rank:
2

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
8262 - 8338

Intron Length:
77

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTACCGACC

5'SS Class:
major

3'SS Sequence:
CCTTTCCCCGCAG|C

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CCCCCAA

U12 Branch Point Sequence:
CCCCCCTTTCCC

Flanking Amino Acid:
PATMYTALPKSGSPFGPVPT

Intron Amino Acid Position:
70

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
67
0.4
1.2
62.1
41.2

Major BPS
45.3
-0.2
1.2
50
35.2

Major PPT
78.6
0.64
0.7
73.1
25.1

Minor 5ss
38
-1.4
3.3
52.9
44

Minor BPS
38.1
-0.9
3.5
51.59
45.6

Associated Gene:

Gene:
CAPG

Ensembl Gene ID:

Chromosome:
PEDO01021387.1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

4779 - 8811
4033