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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01021409.1_3408_3465_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

3408 - 3465

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACGTTGA

5'SS Class:

strong_major

3'SS Sequence:

GGAGAACTGACAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

AGCTCAT

U12 Branch Point Sequence:

TGGGGGAGAACT

Flanking Amino Acid:

QADADVATIQPKGCPMGPGN

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.8

0.84

0.9

75.2

37.7

Major BPS

70.9

0.52

1.1

71.4

36.6

Major PPT

49.3

-0

1.1

39.4

43.5

Minor 5ss

38.5

-1.3

46.2

Minor BPS

35.6

-1

2.5

54.2

46.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005265

Chromosome:

PEDO01021409.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005438

1714 - 3636

1923