Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01021438.1_7910_8040_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7910 - 8040

Intron Length:

131

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGGGGC

5'SS Class:

major

3'SS Sequence:

TGCCTTTCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACCTGAG

U12 Branch Point Sequence:

CTGAGCTAGACG

Flanking Amino Acid:

APPEQRQVDQDYMIALSLQQ

Intron Amino Acid Position:

405

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.1

0.66

1.1

67.5

37.8

Major BPS

48.4

-0.1

1.5

39.9

Major PPT

76.5

0.6

0.8

68.7

37.2

Minor 5ss

28.2

-2.5

3.7

40.6

Minor BPS

42.7

-0.7

2.2

46.55

46.7

Associated Gene:

Gene:

MINDY1

Ensembl Gene ID:

ENSAPLG00000014407

Chromosome:

PEDO01021438.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015008

4517 - 8467

3951

ENSAPLT00000037442

4517 - 8467

3951