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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_10009832_10010819_F


Intron Information:

Intron Rank:
30

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
10009832 - 10010819

Intron Length:
988

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAA|GTAAGTTGG

5'SS Class:
strong_major

3'SS Sequence:
CATCTCATTTCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
ATCTCAT

U12 Branch Point Sequence:
TTTCCATTGACA

Flanking Amino Acid:
HNSESESAPSSMFIMEDDRF

Intron Amino Acid Position:
1042

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
83.8
0.8
0.9
72.5
39.9

Major BPS
86.1
0.9
0.7
85.7
22.9

Major PPT
77.9
0.63
0.9
74.1
34.9

Minor 5ss
41.3
-1
2.8
49.6
41

Minor BPS
69.9
0.62
1.6
81.81
32.3

Associated Gene:

Gene:
RICTOR

Ensembl Gene ID:

Chromosome:
Z

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

9948343 - 10021973
73631

9949711 - 10021868
72158

9948343 - 10021868
73526

9948343 - 10021868
73526