Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_10015889_10017130_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10015889 - 10017130

Intron Length:

1242

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGTATG

5'SS Class:

strong_major

3'SS Sequence:

CTGACTATACCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

TTTTGATTATCA

Flanking Amino Acid:

LPVDINEIFQVKETPYFQKK

Intron Amino Acid Position:

1445

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.4

0.93

0.8

83.5

35.1

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

0.32

55.8

43.3

Minor 5ss

45.4

-0.5

2.5

59.2

45.4

Minor BPS

53.9

0.12

2.2

76.51

40.6

Associated Gene:

Gene:

RICTOR

Ensembl Gene ID:

ENSAPLG00000008632

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009005

9949711 - 10021868

72158

ENSAPLT00000004108

9948343 - 10021868

73526

ENSAPLT00000033935

9948343 - 10021868

73526

ENSAPLT00000021909

9948343 - 10021973

73631