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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_10030542_10031949_R


Intron Information:

Intron Rank:
15

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
10030542 - 10031949

Intron Length:
1408

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
ACT|GTGAGTATT

5'SS Class:
major

3'SS Sequence:
TTTTCTTTCACAG|C

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TTTTAAA

U12 Branch Point Sequence:
TTTTCTTTCACA

Flanking Amino Acid:
NFMYIDTPLDSDMMYLLVLL

Intron Amino Acid Position:
740

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
74.4
0.58
1
80.3
34.1

Major BPS
90.4
1
0.7
90.2
19.3

Major PPT
91.2
0.93
0.6
87.3
23.1

Minor 5ss
39.1
-1.2
3.1
61.3
43

Minor BPS
75.9
0.81
1.6
86.93
31.8

Associated Gene:

Gene:
OSMR

Ensembl Gene ID:

Chromosome:
Z

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

10027926 - 10056287
28362