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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_10033716_10034143_R


Intron Information:

Intron Rank:
13

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
10033716 - 10034143

Intron Length:
428

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAC|GTAAGTTGG

5'SS Class:
major

3'SS Sequence:
TCCATCCTTCCAG|C

3'SS Class:
major_PPT

U2 Branch Point Sequence:
GTTTAAT

U12 Branch Point Sequence:
TTAATGTGAATT

Flanking Amino Acid:
EKKTGFLKEQPPEFCTEVKN

Intron Amino Acid Position:
625

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
77.3
0.64
1.3
69.7
43.7

Major BPS
81.8
0.79
1.1
84
34.5

Major PPT
78.4
0.64
0.8
69.1
36.9

Minor 5ss
41
-1
2.8
48.5
41.1

Minor BPS
47.8
-0
2.1
70.05
41

Associated Gene:

Gene:
OSMR

Ensembl Gene ID:

Chromosome:
Z

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

10027926 - 10056287
28362