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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_10039800_10040967_R


Intron Information:

Intron Rank:
6

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
10039800 - 10040967

Intron Length:
1168

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CGA|GTAAGTCTC

5'SS Class:
major

3'SS Sequence:
CCTTCTTTGACAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TCCCCAT

U12 Branch Point Sequence:
CCTTCTTTGACA

Flanking Amino Acid:
CHSSKHTLFDEFSQNLVPCT

Intron Amino Acid Position:
271

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
75.9
0.61
1.1
69.9
41.1

Major BPS
59.7
0.24
1.3
68.6
38.9

Major PPT
78.3
0.64
0.9
75.1
33.3

Minor 5ss
40.1
-1.1
3
50.3
40.1

Minor BPS
72.7
0.71
1.2
73.66
38.8

Associated Gene:

Gene:
OSMR

Ensembl Gene ID:

Chromosome:
Z

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

10027926 - 10056287
28362