Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_10043856_10046084_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10043856 - 10046084

Intron Length:

2229

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACA|GTAAGTGTT

5'SS Class:

major

3'SS Sequence:

CTTCTCTTTATAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAA

U12 Branch Point Sequence:

TTTTCAATAATT

Flanking Amino Acid:

HRADEATVWTDFHNVTLNKS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.9

0.68

79.3

34.5

Major BPS

90.8

1.01

0.7

91.9

19.6

Major PPT

84.6

0.78

0.7

25.6

Minor 5ss

40.8

-1

3.4

63.8

41.6

Minor BPS

67.9

0.64

1.8

90.51

32.7

Associated Gene:

Gene:

OSMR

Ensembl Gene ID:

ENSAPLG00000008272

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008613

10027926 - 10056287

28362