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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_10182967_10183268_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

10182967 - 10183268

Intron Length:

302

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAT|GTTCGTTCC

5'SS Class:

major

3'SS Sequence:

AGCCCCATGGGAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

AAAAGAT

U12 Branch Point Sequence:

TCTGCTAGGAAA

Flanking Amino Acid:

DWSPVEVSPGIGVFPQDTVV

Intron Amino Acid Position:

181

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

61.8

0.28

1.3

61.1

38.6

Major BPS

50.8

0.02

1.1

47.1

36.1

Major PPT

44.2

-0.3

1.7

43.4

36.8

Minor 5ss

39.2

-1.2

2.9

50.9

38.7

Minor BPS

-0.6

1.8

52.67

39.4

Associated Gene:

Gene:

LIFR

Ensembl Gene ID:

ENSAPLG00000007351

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007714

10176479 - 10204145

27667