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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_10198363_10199940_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10198363 - 10199940

Intron Length:

1578

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGC|GTAAGTGCA

5'SS Class:

major

3'SS Sequence:

ATTCTCCTTACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCATAAT

U12 Branch Point Sequence:

TTTATCTTACTA

Flanking Amino Acid:

KNITGYTKELPPKRAPNFTV

Intron Amino Acid Position:

545

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.1

0.45

1.3

40.2

Major BPS

75.2

0.63

1.1

74.5

36.6

Major PPT

83.8

0.76

0.8

77.1

30.9

Minor 5ss

33.9

-1.8

3.1

37.1

40.4

Minor BPS

64.1

0.44

1.6

75.33

36.5

Associated Gene:

Gene:

LIFR

Ensembl Gene ID:

ENSAPLG00000007351

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007714

10176479 - 10204145

27667