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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_10200109_10200743_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

10200109 - 10200743

Intron Length:

635

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAATGAA

5'SS Class:

strong_major

3'SS Sequence:

TCTAAACAAACAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTCTAAA

U12 Branch Point Sequence:

TTCTTCTAAACA

Flanking Amino Acid:

DALKPRLLESGNPELKVKNI

Intron Amino Acid Position:

601

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.9

0.87

0.9

27.6

Major BPS

85.3

0.88

0.8

84.2

21.8

Major PPT

58.8

0.2

1.1

52.3

40.6

Minor 5ss

31.4

-2.1

3.2

39.9

46.1

Minor BPS

69.4

0.61

1.6

78.35

38.8

Associated Gene:

Gene:

LIFR

Ensembl Gene ID:

ENSAPLG00000007351

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007714

10176479 - 10204145

27667