Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_10218646_10219139_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10218646 - 10219139

Intron Length:

494

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTGAGTGCT

5'SS Class:

strong_major

3'SS Sequence:

TCCTTTTCCCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTCTCAT

U12 Branch Point Sequence:

TGTTGGTGAAGA

Flanking Amino Acid:

QLNINGDLYVGGMREIALHT

Intron Amino Acid Position:

983

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.2

0.99

0.7

26.7

Major BPS

77.2

0.67

1.2

79.6

35.6

Major PPT

82.8

0.74

0.7

76.2

32.4

Minor 5ss

29.9

-2.3

3.2

41.3

45.2

Minor BPS

42.3

-0.5

2.6

60.68

45.1

Associated Gene:

Gene:

EGFLAM

Ensembl Gene ID:

ENSAPLG00000010255

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024989

10218491 - 10293583

75093

ENSAPLT00000010710

10218491 - 10293583

75093