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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_10221298_10222106_R


Intron Information:

Intron Rank:
19

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
10221298 - 10222106

Intron Length:
809

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTAATGTAT

5'SS Class:
strong_major

3'SS Sequence:
TTACATTAAACAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
ATTTTAC

U12 Branch Point Sequence:
CTTACATTAAAC

Flanking Amino Acid:
LIYNNPDILKRVSGARTNVF

Intron Amino Acid Position:
872

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
81.5
0.74
1
77.6
33.1

Major BPS
77.8
0.69
0.9
69.4
37.3

Major PPT
67
0.38
1.1
62.8
41.8

Minor 5ss
38.5
-1.3
3.4
55.5
48.6

Minor BPS
58.5
0.25
1.8
69.98
40.7

Associated Gene:

Gene:
EGFLAM

Ensembl Gene ID:

Chromosome:
Z

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

10218491 - 10293583
75093

10218491 - 10293583
75093