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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_10222186_10226113_R


Intron Information:

Intron Rank:
18

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
10222186 - 10226113

Intron Length:
3928

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTAACGATA

5'SS Class:
major

3'SS Sequence:
TGATACTTTTCAG|C

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTTTAT

U12 Branch Point Sequence:
TTTTTTTTGATA

Flanking Amino Acid:
LGFDGLHCQKAITEAIEIPQ

Intron Amino Acid Position:
846

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
79.1
0.69
1.1
78.7
37.2

Major BPS
96.5
1.15
0.6
86
34.2

Major PPT
77.6
0.62
0.9
73.8
41.2

Minor 5ss
41.4
-1
3.2
57.2
47.1

Minor BPS
74.5
0.76
1
81.02
27.4

Associated Gene:

Gene:
EGFLAM

Ensembl Gene ID:

Chromosome:
Z

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

10218491 - 10293583
75093

10218491 - 10293583
75093