Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_10234884_10234991_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10234884 - 10234991

Intron Length:

108

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTCATTTGC

5'SS Class:

major

3'SS Sequence:

TCCTTTTGTATAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATGACAT

U12 Branch Point Sequence:

TCGTCCAGATTT

Flanking Amino Acid:

LAIPQFNESLSYDTDSKDFL

Intron Amino Acid Position:

641

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.8

0.47

1.3

40.9

Major BPS

58.8

0.22

1.2

66.8

39.9

Major PPT

78.7

0.64

0.8

75.5

33.1

Minor 5ss

-1.6

2.7

45.4

42.4

Minor BPS

46.6

-0.1

65.54

45.2

Associated Gene:

Gene:

EGFLAM

Ensembl Gene ID:

ENSAPLG00000010255

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024989

10218491 - 10293583

75093