Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_10257779_10264296_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10257779 - 10264296

Intron Length:

6518

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CAG|GCAAGTTTT

5'SS Class:

strong_major

3'SS Sequence:

TTTAATCCTGAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TCTATTTTAATC

Flanking Amino Acid:

PIQYYVVEFIRPDLDSNWTV

Intron Amino Acid Position:

200

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

98.6

1.15

0.7

90.9

28.7

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

69.2

0.43

1.1

Minor 5ss

35.8

-1.6

4.1

57.8

46.8

Minor BPS

66.7

0.5

1.2

69.89

36.2

Associated Gene:

Gene:

EGFLAM

Ensembl Gene ID:

ENSAPLG00000010255

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024989

10218491 - 10293583

75093

ENSAPLT00000010710

10218491 - 10293583

75093