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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_10317_10592_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10317 - 10592

Intron Length:

276

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCT|GTAAGCAGG

5'SS Class:

major

3'SS Sequence:

CCTTCTCTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CACTGAC

U12 Branch Point Sequence:

AGCCCACTGACT

Flanking Amino Acid:

GKNRYKFIIPYDHCRVVLQP

Intron Amino Acid Position:

409

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

66.8

0.4

1.2

56.9

47.5

Major BPS

61.3

0.28

52.7

34.2

Major PPT

84.8

0.78

0.7

76.5

32.1

Minor 5ss

41.7

-0.9

2.9

58.7

45.5

Minor BPS

45.7

-0.2

1.9

62.31

40.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005506

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005719

2781 - 13437

10657