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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_105712_111036_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

105712 - 111036

Intron Length:

5325

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGTCCG

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTCCTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

TTTCTAATATGT

Flanking Amino Acid:

DRLMNVLVLMIFGFLALMCL

Intron Amino Acid Position:

243

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.83

0.9

42.9

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

92.5

0.96

0.6

85.6

29.1

Minor 5ss

34.7

-1.7

2.8

39.7

Minor BPS

42.1

-0.5

2.2

67.24

43.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002395

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002472

93540 - 123944

30405