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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_10650371_10650565_R


Intron Information:

Intron Rank:
2

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
10650371 - 10650565

Intron Length:
195

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
TCG|GTGAGCCCC

5'SS Class:
major

3'SS Sequence:
TCCATGTTTTTAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTCTTAA

U12 Branch Point Sequence:
TCCTTCTTAACC

Flanking Amino Acid:
LAATMGFSGFGKKARTFDLE

Intron Amino Acid Position:
28

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
73.5
0.56
1
57.1
42.2

Major BPS
82.2
0.8
0.8
71.9
35.8

Major PPT
75.1
0.56
0.9
72.6
37.5

Minor 5ss
34.2
-1.8
3
44.2
43.2

Minor BPS
77.9
0.86
1.2
77.35
39.1

Associated Gene:

Gene:
WDR70

Ensembl Gene ID:

Chromosome:
Z

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

10513824 - 10650747
136924