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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_10656387_10656826_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10656387 - 10656826

Intron Length:

440

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGAAAC

5'SS Class:

strong_major

3'SS Sequence:

CCGTTATGTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATGTAAT

U12 Branch Point Sequence:

TTGCATGTAATT

Flanking Amino Acid:

DCQLLAITHAGVRLYFSTSQ

Intron Amino Acid Position:

579

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.1

0.9

0.8

80.3

26.9

Major BPS

75.6

0.64

1.1

75.7

36.5

Major PPT

67.5

0.39

65.7

Minor 5ss

28.3

-2.5

2.8

33.7

41.9

Minor BPS

47.7

-0

2.1

69.85

41.7

Associated Gene:

Gene:

NUP155

Ensembl Gene ID:

ENSAPLG00000008857

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025158

10650337 - 10679824

29488

ENSAPLT00000009327

10650337 - 10679824

29488