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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_10668541_10670782_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10668541 - 10670782

Intron Length:

2242

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGATCT

5'SS Class:

strong_major

3'SS Sequence:

TGTCCGTCTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAATAAA

U12 Branch Point Sequence:

TTTGAGCTAATA

Flanking Amino Acid:

FNVVVGELQKELQEHLKITA

Intron Amino Acid Position:

1032

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.2

0.81

0.9

76.9

32.4

Major BPS

70.8

0.52

70.6

31.6

Major PPT

77.3

0.61

0.9

73.4

37.1

Minor 5ss

46.7

-0.3

2.8

45.1

Minor BPS

44.2

-0.4

2.4

64.73

Associated Gene:

Gene:

NUP155

Ensembl Gene ID:

ENSAPLG00000008857

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025158

10650337 - 10679824

29488

ENSAPLT00000009327

10650337 - 10679824

29488