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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_10677440_10678242_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10677440 - 10678242

Intron Length:

803

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTAAGGAAA

5'SS Class:

strong_major

3'SS Sequence:

ATTTATTTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TGTATCTTAATA

Flanking Amino Acid:

EVYDQLFKARDPYWNRMKKP

Intron Amino Acid Position:

1530

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.9

0.75

74.9

Major BPS

100

1.24

0.5

100

Major PPT

83.6

0.76

0.8

34.8

Minor 5ss

31.1

-2.2

3.1

31.2

42.7

Minor BPS

72.9

0.72

1.2

76.56

34.3

Associated Gene:

Gene:

NUP155

Ensembl Gene ID:

ENSAPLG00000008857

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025158

10650337 - 10679824

29488

ENSAPLT00000009327

10650337 - 10679824

29488