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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_10683909_10685400_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10683909 - 10685400

Intron Length:

1492

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTATA

5'SS Class:

strong_major

3'SS Sequence:

TTTCTTTTGTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

ATATATATATTT

Flanking Amino Acid:

PWTRISWIGQEKEAVFLLDD

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

1.15

0.6

96.2

11.9

Major BPS

90.4

0.7

90.2

19.3

Major PPT

86.6

0.82

0.9

88.2

29.1

Minor 5ss

39.3

-1.2

2.8

50.9

45.5

Minor BPS

45.6

-0.2

1.9

65.18

39.4

Associated Gene:

Gene:

CPLANE1

Ensembl Gene ID:

ENSAPLG00000008819

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009175

10683828 - 10739970

56143