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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_10685537_10685727_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

10685537 - 10685727

Intron Length:

191

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGTATA

5'SS Class:

strong_major

3'SS Sequence:

CTAATGAACACAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ATTAAAT

U12 Branch Point Sequence:

TCTCCCCTAATG

Flanking Amino Acid:

NVVVLTTSGNGAWLAGILTT

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.2

0.97

0.8

88.9

24.9

Major BPS

73.5

0.58

79.3

29.4

Major PPT

58.1

0.18

1.1

50.7

41.6

Minor 5ss

39.5

-1.2

2.8

48.3

41.8

Minor BPS

59.5

0.16

1.8

65.6

42.3

Associated Gene:

Gene:

CPLANE1

Ensembl Gene ID:

ENSAPLG00000008819

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009175

10683828 - 10739970

56143