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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_10696106_10696749_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10696106 - 10696749

Intron Length:

644

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGGGAT

5'SS Class:

strong_major

3'SS Sequence:

TCTTTTAATGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

CCTCTTTTAATG

Flanking Amino Acid:

KRSLCEIKAKGGKRACFLQT

Intron Amino Acid Position:

836

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.3

0.74

38.2

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

82.3

0.73

0.9

78.2

33.9

Minor 5ss

30.4

-2.2

3.6

46.9

Minor BPS

57.2

0.09

1.4

55.3

41.2

Associated Gene:

Gene:

CPLANE1

Ensembl Gene ID:

ENSAPLG00000008819

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009175

10683828 - 10739970

56143