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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_10696919_10697648_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

10696919 - 10697648

Intron Length:

730

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAT|GTCTGAATT

5'SS Class:

weak_major

3'SS Sequence:

TCTTTTTAGATAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

TCTAATTTGACA

Flanking Amino Acid:

SMKQMEKFSGIKYSQHELWM

Intron Amino Acid Position:

892

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.24

1.3

70.2

39.9

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

73.9

0.54

72.9

36.6

Minor 5ss

43.3

-0.7

63.2

41.2

Minor BPS

57.9

0.24

1.6

67.86

38.5

Associated Gene:

Gene:

CPLANE1

Ensembl Gene ID:

ENSAPLG00000008819

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009175

10683828 - 10739970

56143