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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_10701627_10701858_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10701627 - 10701858

Intron Length:

232

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAATCTG

5'SS Class:

strong_major

3'SS Sequence:

GTTATACTTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTAAT

U12 Branch Point Sequence:

TTATTGTTAATG

Flanking Amino Acid:

LYCQNSNEFSRLKNTEHHLP

Intron Amino Acid Position:

1025

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.3

0.83

0.9

75.1

41.1

Major BPS

84.4

0.85

34.5

Major PPT

77.8

0.63

0.9

70.5

40.1

Minor 5ss

37.2

-1.4

3.1

49.5

46.7

Minor BPS

58.3

0.12

2.1

67.41

40.8

Associated Gene:

Gene:

CPLANE1

Ensembl Gene ID:

ENSAPLG00000008819

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009175

10683828 - 10739970

56143