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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_10705440_10707173_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10705440 - 10707173

Intron Length:

1734

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGCATT

5'SS Class:

strong_major

3'SS Sequence:

TTGCTATCTATAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTTAT

U12 Branch Point Sequence:

ATTTACTTATTT

Flanking Amino Acid:

LKWARKIMQKIRMKGSLPSM

Intron Amino Acid Position:

1200

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.78

0.9

84.6

33.2

Major BPS

83.6

0.84

0.8

71.9

35.8

Major PPT

75.5

0.57

0.9

35.6

Minor 5ss

-0.3

2.9

67.1

37.8

Minor BPS

65.2

0.55

1.8

83.5

37.5

Associated Gene:

Gene:

CPLANE1

Ensembl Gene ID:

ENSAPLG00000008819

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009175

10683828 - 10739970

56143