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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_10708740_10708895_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10708740 - 10708895

Intron Length:

156

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAAGAA

5'SS Class:

strong_major

3'SS Sequence:

CTATATTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACTGAA

U12 Branch Point Sequence:

TTGTCTGTTACG

Flanking Amino Acid:

LLGELPPDKKVAEIFVKAFP

Intron Amino Acid Position:

1337

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.9

0.75

0.9

73.7

30.1

Major BPS

74.4

0.61

0.9

63.6

35.5

Major PPT

82.3

0.73

0.9

76.7

36.8

Minor 5ss

29.1

-2.4

3.4

37.8

Minor BPS

48.4

-0.2

2.3

62.77

45.4

Associated Gene:

Gene:

CPLANE1

Ensembl Gene ID:

ENSAPLG00000008819

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009175

10683828 - 10739970

56143