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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_10709676_10710118_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10709676 - 10710118

Intron Length:

443

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGGATA

5'SS Class:

strong_major

3'SS Sequence:

TCTTGTCTGACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

TTGATGTTAATT

Flanking Amino Acid:

EMRAQTPSPQRDNEHQGQGE

Intron Amino Acid Position:

1475

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.6

0.82

0.9

80.5

33.7

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

76.2

0.59

72.2

Minor 5ss

41.9

-0.9

3.1

56.7

47.6

Minor BPS

55.5

0.25

2.1

75.74

41.6

Associated Gene:

Gene:

CPLANE1

Ensembl Gene ID:

ENSAPLG00000008819

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009175

10683828 - 10739970

56143