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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_10718227_10718821_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

10718227 - 10718821

Intron Length:

595

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGCATC

5'SS Class:

strong_major

3'SS Sequence:

TGTGTCTATCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTAAT

U12 Branch Point Sequence:

TTTGTGTTAATT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.4

0.88

0.8

81.3

32.8

Major BPS

84.4

0.85

34.5

Major PPT

75.1

0.56

66.4

44.3

Minor 5ss

38.5

-1.3

51.2

45.7

Minor BPS

60.4

0.4

2.1

82.74

39.5

Associated Gene:

Gene:

CPLANE1

Ensembl Gene ID:

ENSAPLG00000008819

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009039

10715206 - 10728946

13741

ENSAPLT00000009175

10683828 - 10739970

56143