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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_10719110_10719300_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

10719110 - 10719300

Intron Length:

191

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGA|GTAAGTACA

5'SS Class:

major

3'SS Sequence:

TCTTTGCTTTTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

GTACTTTTAAAT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.3

0.64

74.4

Major BPS

90.4

0.7

90.2

19.3

Major PPT

0.74

0.8

81.2

30.9

Minor 5ss

37.3

-1.4

2.6

40.4

39.1

Minor BPS

60.3

0.4

1.4

72.2

38.1

Associated Gene:

Gene:

CPLANE1

Ensembl Gene ID:

ENSAPLG00000008819

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009039

10715206 - 10728946

13741