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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_10719114_10719352_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

10719114 - 10719352

Intron Length:

239

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAA|GTACATCAG

5'SS Class:

major

3'SS Sequence:

AGCCACAGCAAAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TCTTCAA

U12 Branch Point Sequence:

GTTTCTTCAAGC

Flanking Amino Acid:

DESNNGNIRVKTGFIPPSRD

Intron Amino Acid Position:

1938

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

64.3

0.34

1.1

56.1

Major BPS

78.2

0.7

79.9

32.6

Major PPT

-0.2

1.1

37.3

32.5

Minor 5ss

33.6

-1.9

3.2

40.1

40.3

Minor BPS

58.9

0.26

1.9

71.25

40.1

Associated Gene:

Gene:

CPLANE1

Ensembl Gene ID:

ENSAPLG00000008819

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009175

10683828 - 10739970

56143