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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_10725675_10725964_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

10725675 - 10725964

Intron Length:

290

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAACCAT

5'SS Class:

major

3'SS Sequence:

ATGTCAAGCCAAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TCCTAAA

U12 Branch Point Sequence:

TCATCCTAAAGA

Flanking Amino Acid:

AIPPEPLQKKVQKEDKPFSS

Intron Amino Acid Position:

2253

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.9

0.7

71.2

40.6

Major BPS

72.7

0.57

72.1

31.1

Major PPT

48.6

-0

1.1

43.1

Minor 5ss

38.9

-1.2

3.3

55.8

48.4

Minor BPS

56.6

0.2

67.7

44.8

Associated Gene:

Gene:

CPLANE1

Ensembl Gene ID:

ENSAPLG00000008819

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009175

10683828 - 10739970

56143