Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_10761071_10761617_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10761071 - 10761617

Intron Length:

547

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACT|GTAAGTGTT

5'SS Class:

major

3'SS Sequence:

GTCTATTTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTATAC

U12 Branch Point Sequence:

TTTTGTCTATTT

Flanking Amino Acid:

DTRMQQADRDWKKVAKQEDL

Intron Amino Acid Position:

2017

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.2

0.64

1.1

78.6

35.6

Major BPS

60.5

0.26

58.8

37.7

Major PPT

82.2

0.72

0.9

75.7

37.9

Minor 5ss

41.5

-0.9

3.5

68.1

42.7

Minor BPS

47.8

-0

2.2

75.99

41.5

Associated Gene:

Gene:

NIPBL

Ensembl Gene ID:

ENSAPLG00000008108

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008820

10753873 - 10861034

107162

ENSAPLT00000008435

10753873 - 10861034

107162