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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_10775703_10775811_R


Intron Information:

Intron Rank:
26

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
10775703 - 10775811

Intron Length:
109

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AGG|GTAAATAAT

5'SS Class:
major

3'SS Sequence:
TTGTTCTTTTCAG|C

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TTCTTAT

U12 Branch Point Sequence:
TTATTTTGGATT

Flanking Amino Acid:
VAVDPSILARLDMQRGVHGR

Intron Amino Acid Position:
1572

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
79.7
0.7
1
80.3
34.3

Major BPS
91.4
1.03
0.7
79.9
34.9

Major PPT
90.2
0.9
0.7
88.7
28.3

Minor 5ss
36.3
-1.6
2.9
42.5
44.5

Minor BPS
58.2
0.34
1.4
75.39
35.5

Associated Gene:

Gene:
NIPBL

Ensembl Gene ID:

Chromosome:
Z

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

10753873 - 10861034
107162

10753873 - 10861034
107162