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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_10780597_10782688_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10780597 - 10782688

Intron Length:

2092

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGGGAT

5'SS Class:

strong_major

3'SS Sequence:

CTGCTTTTCTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTAAA

U12 Branch Point Sequence:

AAAAAATTAAAA

Flanking Amino Acid:

LLLSLLGRLLVHQFSNKSTE

Intron Amino Acid Position:

1355

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.1

0.78

0.9

74.8

35.1

Major BPS

73.8

0.59

0.9

26.8

Major PPT

77.1

0.61

0.8

76.4

32.2

Minor 5ss

-2.2

3.6

43.1

45.5

Minor BPS

45.3

-0.3

1.8

53.28

37.1

Associated Gene:

Gene:

NIPBL

Ensembl Gene ID:

ENSAPLG00000008108

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008435

10753873 - 10861034

107162

ENSAPLT00000008820

10753873 - 10861034

107162