Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_10784051_10784253_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10784051 - 10784253

Intron Length:

203

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTACGGAAG

5'SS Class:

major

3'SS Sequence:

TTCTTATTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

GTCTTCTTATTT

Flanking Amino Acid:

TNSEEESNKKVDQDVLITNS

Intron Amino Acid Position:

1283

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.2

0.48

1.1

63.5

42.6

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

86.1

0.81

0.7

85.4

28.1

Minor 5ss

32.3

-2

3.3

39.1

40.8

Minor BPS

0.49

1.6

75.8

41.6

Associated Gene:

Gene:

NIPBL

Ensembl Gene ID:

ENSAPLG00000008108

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008820

10753873 - 10861034

107162

ENSAPLT00000008435

10753873 - 10861034

107162